Files
LEANN/examples/main_cli_example.py
Andy Lee 4671ed9b36 Fix macos ABI by using system default clang (#11)
* fix: auto-detect normalized embeddings and use cosine distance

- Add automatic detection for normalized embedding models (OpenAI, Voyage AI, Cohere)
- Automatically set distance_metric='cosine' for normalized embeddings
- Add warnings when using non-optimal distance metrics
- Implement manual L2 normalization in HNSW backend (custom Faiss build lacks normalize_L2)
- Fix DiskANN zmq_port compatibility with lazy loading strategy
- Add documentation for normalized embeddings feature

This fixes the low accuracy issue when using OpenAI text-embedding-3-small model with default MIPS metric.

* style: format

* feat: add OpenAI embeddings support to google_history_reader_leann.py

- Add --embedding-model and --embedding-mode arguments
- Support automatic detection of normalized embeddings
- Works correctly with cosine distance for OpenAI embeddings

* feat: add --use-existing-index option to google_history_reader_leann.py

- Allow using existing index without rebuilding
- Useful for testing pre-built indices

* fix: Improve OpenAI embeddings handling in HNSW backend

* fix: improve macOS C++ compatibility and add CI tests

* refactor: improve test structure and fix main_cli example

- Move pytest configuration from pytest.ini to pyproject.toml
- Remove unnecessary run_tests.py script (use test extras instead)
- Fix main_cli_example.py to properly use command line arguments for LLM config
- Add test_readme_examples.py to test code examples from README
- Refactor tests to use pytest fixtures and parametrization
- Update test documentation to reflect new structure
- Set proper environment variables in CI for test execution

* fix: add --distance-metric support to DiskANN embedding server and remove obsolete macOS ABI test markers

- Add --distance-metric parameter to diskann_embedding_server.py for consistency with other backends
- Remove pytest.skip and pytest.xfail markers for macOS C++ ABI issues as they have been fixed
- Fix test assertions to handle SearchResult objects correctly
- All tests now pass on macOS with the C++ ABI compatibility fixes

* chore: update lock file with test dependencies

* docs: remove obsolete C++ ABI compatibility warnings

- Remove outdated macOS C++ compatibility warnings from README
- Simplify CI workflow by removing macOS-specific failure handling
- All tests now pass consistently on macOS after ABI fixes

* fix: update macOS deployment target for DiskANN to 13.3

- DiskANN uses sgesdd_ LAPACK function which is only available on macOS 13.3+
- Update MACOSX_DEPLOYMENT_TARGET from 11.0 to 13.3 for DiskANN builds
- This fixes the compilation error on GitHub Actions macOS runners

* fix: align Python version requirements to 3.9

- Update root project to support Python 3.9, matching subpackages
- Restore macOS Python 3.9 support in CI
- This fixes the CI failure for Python 3.9 environments

* fix: handle MPS memory issues in CI tests

- Use smaller MiniLM-L6-v2 model (384 dimensions) for README tests in CI
- Skip other memory-intensive tests in CI environment
- Add minimal CI tests that don't require model loading
- Set CI environment variable and disable MPS fallback
- Ensure README examples always run correctly in CI

* fix: remove Python 3.10+ dependencies for compatibility

- Comment out llama-index-readers-docling and llama-index-node-parser-docling
- These packages require Python >= 3.10 and were causing CI failures on Python 3.9
- Regenerate uv.lock file to resolve dependency conflicts

* fix: use virtual environment in CI instead of system packages

- uv-managed Python environments don't allow --system installs
- Create and activate virtual environment before installing packages
- Update all CI steps to use the virtual environment

* add some env in ci

* fix: use --find-links to install platform-specific wheels

- Let uv automatically select the correct wheel for the current platform
- Fixes error when trying to install macOS wheels on Linux
- Simplifies the installation logic

* fix: disable OpenMP parallelism in CI to avoid libomp crashes

- Set OMP_NUM_THREADS=1 to avoid OpenMP thread synchronization issues
- Set MKL_NUM_THREADS=1 for single-threaded MKL operations
- This prevents segfaults in LayerNorm on macOS CI runners
- Addresses the libomp compatibility issues with PyTorch on Apple Silicon

* skip several macos test because strange issue on ci

---------

Co-authored-by: yichuan520030910320 <yichuan_wang@berkeley.edu>
2025-07-28 17:14:42 -07:00

147 lines
5.0 KiB
Python

import argparse
import asyncio
from pathlib import Path
import dotenv
from leann.api import LeannBuilder, LeannChat
from llama_index.core import SimpleDirectoryReader
from llama_index.core.node_parser import SentenceSplitter
dotenv.load_dotenv()
async def main(args):
INDEX_DIR = Path(args.index_dir)
INDEX_PATH = str(INDEX_DIR / "pdf_documents.leann")
if not INDEX_DIR.exists():
node_parser = SentenceSplitter(
chunk_size=256, chunk_overlap=128, separator=" ", paragraph_separator="\n\n"
)
print("Loading documents...")
documents = SimpleDirectoryReader(
args.data_dir,
recursive=True,
encoding="utf-8",
required_exts=[".pdf", ".txt", ".md"],
).load_data(show_progress=True)
print("Documents loaded.")
all_texts = []
for doc in documents:
nodes = node_parser.get_nodes_from_documents([doc])
if nodes:
all_texts.extend(node.get_content() for node in nodes)
print("--- Index directory not found, building new index ---")
print("\n[PHASE 1] Building Leann index...")
# LeannBuilder now automatically detects normalized embeddings and sets appropriate distance metric
print(f"Using {args.embedding_model} with {args.embedding_mode} mode")
# Use HNSW backend for better macOS compatibility
builder = LeannBuilder(
backend_name="hnsw",
embedding_model=args.embedding_model,
embedding_mode=args.embedding_mode,
# distance_metric is automatically set based on embedding model
graph_degree=32,
complexity=64,
is_compact=True,
is_recompute=True,
num_threads=1, # Force single-threaded mode
)
print(f"Loaded {len(all_texts)} text chunks from documents.")
for chunk_text in all_texts:
builder.add_text(chunk_text)
builder.build_index(INDEX_PATH)
print(f"\nLeann index built at {INDEX_PATH}!")
else:
print(f"--- Using existing index at {INDEX_DIR} ---")
print("\n[PHASE 2] Starting Leann chat session...")
# Build llm_config based on command line arguments
if args.llm == "simulated":
llm_config = {"type": "simulated"}
elif args.llm == "ollama":
llm_config = {"type": "ollama", "model": args.model, "host": args.host}
elif args.llm == "hf":
llm_config = {"type": "hf", "model": args.model}
elif args.llm == "openai":
llm_config = {"type": "openai", "model": args.model}
else:
raise ValueError(f"Unknown LLM type: {args.llm}")
print(f"Using LLM: {args.llm} with model: {args.model if args.llm != 'simulated' else 'N/A'}")
chat = LeannChat(index_path=INDEX_PATH, llm_config=llm_config)
# query = (
# "什么是盘古大模型以及盘古开发过程中遇到了什么阴暗面,任务令一般在什么城市颁发"
# )
query = args.query
print(f"You: {query}")
chat_response = chat.ask(query, top_k=20, recompute_embeddings=True, complexity=32)
print(f"Leann chat response: \033[36m{chat_response}\033[0m")
if __name__ == "__main__":
parser = argparse.ArgumentParser(description="Run Leann Chat with various LLM backends.")
parser.add_argument(
"--llm",
type=str,
default="hf",
choices=["simulated", "ollama", "hf", "openai"],
help="The LLM backend to use.",
)
parser.add_argument(
"--model",
type=str,
default="Qwen/Qwen3-0.6B",
help="The model name to use (e.g., 'llama3:8b' for ollama, 'deepseek-ai/deepseek-llm-7b-chat' for hf, 'gpt-4o' for openai).",
)
parser.add_argument(
"--embedding-model",
type=str,
default="facebook/contriever",
help="The embedding model to use (e.g., 'facebook/contriever', 'text-embedding-3-small').",
)
parser.add_argument(
"--embedding-mode",
type=str,
default="sentence-transformers",
choices=["sentence-transformers", "openai", "mlx"],
help="The embedding backend mode.",
)
parser.add_argument(
"--host",
type=str,
default="http://localhost:11434",
help="The host for the Ollama API.",
)
parser.add_argument(
"--index-dir",
type=str,
default="./test_doc_files",
help="Directory where the Leann index will be stored.",
)
parser.add_argument(
"--data-dir",
type=str,
default="examples/data",
help="Directory containing documents to index (PDF, TXT, MD files).",
)
parser.add_argument(
"--query",
type=str,
default="Based on the paper, what are the main techniques LEANN explores to reduce the storage overhead and DLPM explore to achieve Fairness and Efiiciency trade-off?",
help="The query to ask the Leann chat system.",
)
args = parser.parse_args()
asyncio.run(main(args))