chore: release v0.2.4

Feature/claude code research

README.md

@@ -16,9 +16,7 @@ LEANN is an innovative vector database that democratizes personal AI. Transform
 
 LEANN achieves this through *graph-based selective recomputation* with *high-degree preserving pruning*, computing embeddings on-demand instead of storing them all. [Illustration Fig →](#️-architecture--how-it-works) | [Paper →](https://arxiv.org/abs/2506.08276)
 
-**Ready to RAG Everything?** Transform your laptop into a personal AI assistant that can search your **[file system](#-personal-data-manager-process-any-documents-pdf-txt-md)**, **[emails](#-your-personal-email-secretary-rag-on-apple-mail)**, **[browser history](#-time-machine-for-the-web-rag-your-entire-browser-history)**, **[chat history](#-wechat-detective-unlock-your-golden-memories)**, or external knowledge bases (i.e., 60M documents) - all on your laptop, with zero cloud costs and complete privacy.
-
-> **🚀 NEW: Claude Code Integration!** LEANN now provides native MCP integration for Claude Code users. Index your codebase and get intelligent code assistance directly in Claude Code. [Setup Guide →](packages/leann-mcp/README.md)
+**Ready to RAG Everything?** Transform your laptop into a personal AI assistant that can search your **[codebase](#-claude-code-integration-transform-your-development-workflow)**, **[file system](#-personal-data-manager-process-any-documents-pdf-txt-md)**, **[emails](#-your-personal-email-secretary-rag-on-apple-mail)**, **[browser history](#-time-machine-for-the-web-rag-your-entire-browser-history)**, **[chat history](#-wechat-detective-unlock-your-golden-memories)**, or external knowledge bases (i.e., 60M documents) - all on your laptop, with zero cloud costs and complete privacy.
 
 
 
@@ -213,6 +211,30 @@ All RAG examples share these common parameters. **Interactive mode** is availabl
 
 </details>
 
+### 🚀 Claude Code Integration: Transform Your Development Workflow!
+
+**The future of code assistance is here.** Transform your development workflow with LEANN's native MCP integration for Claude Code. Index your entire codebase and get intelligent code assistance directly in your IDE.
+
+<p align="center">
+  <img src="https://img.shields.io/badge/MCP-Native%20Integration-blue?style=flat-square" alt="MCP Integration">
+  <a href="https://github.com/yichuan-w/LEANN/tree/feature/graph-partition-support?tab=readme-ov-file#rag-on-everything"><img src="https://img.shields.io/twitter/url?url=https%3A%2F%2Fgithub.com%2Fyichuan-w%2FLEANN&style=social" alt="Twitter"></a>
+</p>
+
+**Key features:**
+- 🔍 **Semantic code search** across your entire project
+- 📚 **Context-aware assistance** for debugging and development
+- 🚀 **Zero-config setup** with automatic language detection
+- 🔒 **Complete privacy** - your code never leaves your machine
+
+```bash
+# Install LEANN globally for MCP integration
+uv tool install leann-core
+
+# Setup is automatic - just start using Claude Code!
+```
+
+**Ready to supercharge your coding?** [Complete Setup Guide →](packages/leann-mcp/README.md)
+
 ### 📄 Personal Data Manager: Process Any Documents (`.pdf`, `.txt`, `.md`)!
 
 Ask questions directly about your personal PDFs, documents, and any directory containing your files!
@@ -417,7 +439,6 @@ Once the index is built, you can ask questions like:
 </details>
 
 
-
 ## 🖥️ Command Line Interface
 
 LEANN includes a powerful CLI for document processing and search. Perfect for quick document indexing and interactive chat.

docs/claude-code-integration.md

@@ -1,150 +0,0 @@
-# Claude Code x LEANN 集成指南
-
-## ✅ 现状：已经可以工作！
-
-好消息：LEANN CLI已经完全可以在Claude Code中使用，无需任何修改！
-
-## 🚀 立即开始
-
-### 1. 激活环境
-```bash
-# 在LEANN项目目录下
-source .venv/bin/activate.fish  # fish shell
-# 或
-source .venv/bin/activate       # bash shell
-```
-
-### 2. 基本命令
-
-#### 查看现有索引
-```bash
-leann list
-```
-
-#### 搜索文档
-```bash
-leann search my-docs "machine learning" --recompute-embeddings
-```
-
-#### 问答对话
-```bash
-echo "What is machine learning?" | leann ask my-docs --llm ollama --model qwen3:8b --recompute-embeddings
-```
-
-#### 构建新索引
-```bash
-leann build project-docs --docs ./src --recompute-embeddings
-```
-
-## 💡 Claude Code 使用技巧
-
-### 在Claude Code中直接使用
-
-1. **激活环境**：
-   ```bash
-   cd /Users/andyl/Projects/LEANN-RAG
-   source .venv/bin/activate.fish
-   ```
-
-2. **搜索代码库**：
-   ```bash
-   leann search my-docs "authentication patterns" --recompute-embeddings --top-k 10
-   ```
-
-3. **智能问答**：
-   ```bash
-   echo "How does the authentication system work?" | leann ask my-docs --llm ollama --model qwen3:8b --recompute-embeddings
-   ```
-
-### 批量操作示例
-
-```bash
-# 构建项目文档索引
-leann build project-docs --docs ./docs --force
-
-# 搜索多个关键词
-leann search project-docs "API authentication" --recompute-embeddings
-leann search project-docs "database schema" --recompute-embeddings
-leann search project-docs "deployment guide" --recompute-embeddings
-
-# 问答模式
-echo "What are the API endpoints?" | leann ask project-docs --recompute-embeddings
-```
-
-## 🎯 Claude 可以立即执行的工作流
-
-### 代码分析工作流
-```bash
-# 1. 构建代码库索引
-leann build codebase --docs ./src --backend hnsw --recompute-embeddings
-
-# 2. 分析架构
-echo "What is the overall architecture?" | leann ask codebase --recompute-embeddings
-
-# 3. 查找特定功能
-leann search codebase "user authentication" --recompute-embeddings --top-k 5
-
-# 4. 理解实现细节
-echo "How is user authentication implemented?" | leann ask codebase --recompute-embeddings
-```
-
-### 文档理解工作流
-```bash
-# 1. 索引项目文档
-leann build docs --docs ./docs --recompute-embeddings
-
-# 2. 快速查找信息
-leann search docs "installation requirements" --recompute-embeddings
-
-# 3. 获取详细说明
-echo "What are the system requirements?" | leann ask docs --recompute-embeddings
-```
-
-## ⚠️ 重要提示
-
-1. **必须使用 `--recompute-embeddings`** - 这是关键参数，不加会报错
-2. **需要先激活虚拟环境** - 确保有LEANN的Python环境
-3. **Ollama需要预先安装** - ask功能需要本地LLM
-
-## 🔥 立即可用的Claude提示词
-
-```
-Help me analyze this codebase using LEANN:
-
-1. First, activate the environment:
-   cd /Users/andyl/Projects/LEANN-RAG && source .venv/bin/activate.fish
-
-2. Build an index of the source code:
-   leann build codebase --docs ./src --recompute-embeddings
-
-3. Search for authentication patterns:
-   leann search codebase "authentication middleware" --recompute-embeddings --top-k 10
-
-4. Ask about the authentication system:
-   echo "How does user authentication work in this codebase?" | leann ask codebase --recompute-embeddings
-
-Please execute these commands and help me understand the code structure.
-```
-
-## 📈 下一步改进计划
-
-虽然现在已经可以用，但还可以进一步优化：
-
-1. **简化命令** - 默认启用recompute-embeddings
-2. **配置文件** - 避免重复输入参数
-3. **状态管理** - 自动检测环境和索引
-4. **输出格式** - 更适合Claude解析的格式
-
-但这些都是锦上添花，现在就能用起来！
-
-## 🎉 总结
-
-**LEANN现在就可以在Claude Code中完美工作！**
-
-- ✅ 搜索功能正常
-- ✅ RAG问答功能正常
-- ✅ 索引构建功能正常
-- ✅ 支持多种数据源
-- ✅ 支持本地LLM
-
-只需要记住加上 `--recompute-embeddings` 参数就行！

packages/leann-backend-diskann/pyproject.toml

@@ -4,8 +4,8 @@ build-backend = "scikit_build_core.build"
 
 [project]
 name = "leann-backend-diskann"
-version = "0.2.1"
-dependencies = ["leann-core==0.2.1", "numpy", "protobuf>=3.19.0"]
+version = "0.2.4"
+dependencies = ["leann-core==0.2.4", "numpy", "protobuf>=3.19.0"]
 
 [tool.scikit-build]
 # Key: simplified CMake path

packages/leann-backend-hnsw/pyproject.toml

@@ -6,10 +6,10 @@ build-backend = "scikit_build_core.build"
 
 [project]
 name = "leann-backend-hnsw"
-version = "0.2.1"
+version = "0.2.4"
 description = "Custom-built HNSW (Faiss) backend for the Leann toolkit."
 dependencies = [
-    "leann-core==0.2.1",
+    "leann-core==0.2.4",
     "numpy",
     "pyzmq>=23.0.0",
     "msgpack>=1.0.0",

packages/leann-core/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "leann-core"
-version = "0.2.1"
+version = "0.2.4"
 description = "Core API and plugin system for LEANN"
 readme = "README.md"
 requires-python = ">=3.9"

packages/leann-core/src/leann/cli.py

@@ -74,10 +74,11 @@ class LeannCLI:
             formatter_class=argparse.RawDescriptionHelpFormatter,
             epilog="""
 Examples:
-  leann build my-docs --docs ./documents    # Build index named my-docs
-  leann search my-docs "query"             # Search in my-docs index
-  leann ask my-docs "question"             # Ask my-docs index
-  leann list                              # List all stored indexes
+  leann build my-docs --docs ./documents                    # Build index named my-docs
+  leann build my-ppts --docs ./ --file-types .pptx,.pdf    # Index only PowerPoint and PDF files
+  leann search my-docs "query"                             # Search in my-docs index
+  leann ask my-docs "question"                             # Ask my-docs index
+  leann list                                              # List all stored indexes
             """,
         )
 
@@ -99,6 +100,11 @@ Examples:
         build_parser.add_argument("--num-threads", type=int, default=1)
         build_parser.add_argument("--compact", action="store_true", default=True)
         build_parser.add_argument("--recompute", action="store_true", default=True)
+        build_parser.add_argument(
+            "--file-types",
+            type=str,
+            help="Comma-separated list of file extensions to include (e.g., '.txt,.pdf,.pptx'). If not specified, uses default supported types.",
+        )
 
         # Search command
         search_parser = subparsers.add_parser("search", help="Search documents")
@@ -108,7 +114,12 @@ Examples:
         search_parser.add_argument("--complexity", type=int, default=64)
         search_parser.add_argument("--beam-width", type=int, default=1)
         search_parser.add_argument("--prune-ratio", type=float, default=0.0)
-        search_parser.add_argument("--recompute-embeddings", action="store_true")
+        search_parser.add_argument(
+            "--recompute-embeddings",
+            action="store_true",
+            default=True,
+            help="Recompute embeddings (default: True)",
+        )
         search_parser.add_argument(
             "--pruning-strategy",
             choices=["global", "local", "proportional"],
@@ -131,7 +142,12 @@ Examples:
         ask_parser.add_argument("--complexity", type=int, default=32)
         ask_parser.add_argument("--beam-width", type=int, default=1)
         ask_parser.add_argument("--prune-ratio", type=float, default=0.0)
-        ask_parser.add_argument("--recompute-embeddings", action="store_true")
+        ask_parser.add_argument(
+            "--recompute-embeddings",
+            action="store_true",
+            default=True,
+            help="Recompute embeddings (default: True)",
+        )
         ask_parser.add_argument(
             "--pruning-strategy",
             choices=["global", "local", "proportional"],
@@ -254,8 +270,10 @@ Examples:
                     print(f'  leann search {example_name} "your query"')
                     print(f"  leann ask {example_name} --interactive")
 
-    def load_documents(self, docs_dir: str):
+    def load_documents(self, docs_dir: str, custom_file_types: str | None = None):
         print(f"Loading documents from {docs_dir}...")
+        if custom_file_types:
+            print(f"Using custom file types: {custom_file_types}")
 
         # Try to use better PDF parsers first
         documents = []
@@ -287,66 +305,81 @@ Examples:
                 documents.extend(default_docs)
 
         # Load other file types with default reader
-        code_extensions = [
-            # Original document types
-            ".txt",
-            ".md",
-            ".docx",
-            # Code files for Claude Code integration
-            ".py",
-            ".js",
-            ".ts",
-            ".jsx",
-            ".tsx",
-            ".java",
-            ".cpp",
-            ".c",
-            ".h",
-            ".hpp",
-            ".cs",
-            ".go",
-            ".rs",
-            ".rb",
-            ".php",
-            ".swift",
-            ".kt",
-            ".scala",
-            ".r",
-            ".sql",
-            ".sh",
-            ".bash",
-            ".zsh",
-            ".fish",
-            ".ps1",
-            ".bat",
-            # Config and markup files
-            ".json",
-            ".yaml",
-            ".yml",
-            ".xml",
-            ".toml",
-            ".ini",
-            ".cfg",
-            ".conf",
-            ".html",
-            ".css",
-            ".scss",
-            ".less",
-            ".vue",
-            ".svelte",
-            # Data science
-            ".ipynb",
-            ".R",
-            ".py",
-            ".jl",
-        ]
-        other_docs = SimpleDirectoryReader(
-            docs_dir,
-            recursive=True,
-            encoding="utf-8",
-            required_exts=code_extensions,
-        ).load_data(show_progress=True)
-        documents.extend(other_docs)
+        if custom_file_types:
+            # Parse custom file types from comma-separated string
+            code_extensions = [ext.strip() for ext in custom_file_types.split(",") if ext.strip()]
+            # Ensure extensions start with a dot
+            code_extensions = [ext if ext.startswith(".") else f".{ext}" for ext in code_extensions]
+        else:
+            # Use default supported file types
+            code_extensions = [
+                # Original document types
+                ".txt",
+                ".md",
+                ".docx",
+                ".pptx",
+                # Code files for Claude Code integration
+                ".py",
+                ".js",
+                ".ts",
+                ".jsx",
+                ".tsx",
+                ".java",
+                ".cpp",
+                ".c",
+                ".h",
+                ".hpp",
+                ".cs",
+                ".go",
+                ".rs",
+                ".rb",
+                ".php",
+                ".swift",
+                ".kt",
+                ".scala",
+                ".r",
+                ".sql",
+                ".sh",
+                ".bash",
+                ".zsh",
+                ".fish",
+                ".ps1",
+                ".bat",
+                # Config and markup files
+                ".json",
+                ".yaml",
+                ".yml",
+                ".xml",
+                ".toml",
+                ".ini",
+                ".cfg",
+                ".conf",
+                ".html",
+                ".css",
+                ".scss",
+                ".less",
+                ".vue",
+                ".svelte",
+                # Data science
+                ".ipynb",
+                ".R",
+                ".py",
+                ".jl",
+            ]
+        # Try to load other file types, but don't fail if none are found
+        try:
+            other_docs = SimpleDirectoryReader(
+                docs_dir,
+                recursive=True,
+                encoding="utf-8",
+                required_exts=code_extensions,
+            ).load_data(show_progress=True)
+            documents.extend(other_docs)
+        except ValueError as e:
+            if "No files found" in str(e):
+                print("No additional files found for other supported types.")
+            else:
+                raise e
 
         all_texts = []
 
@@ -424,7 +457,7 @@ Examples:
             print(f"Index '{index_name}' already exists. Use --force to rebuild.")
             return
 
-        all_texts = self.load_documents(docs_dir)
+        all_texts = self.load_documents(docs_dir, args.file_types)
         if not all_texts:
             print("No documents found")
             return

packages/leann-core/src/leann/mcp.py

@@ -1,7 +1,6 @@
 #!/usr/bin/env python3
 
 import json
-import os
 import subprocess
 import sys
 
@@ -62,10 +61,6 @@ def handle_request(request):
         tool_name = request["params"]["name"]
         args = request["params"].get("arguments", {})
 
-        # Set working directory and environment
-        env = os.environ.copy()
-        cwd = "/Users/andyl/Projects/LEANN-RAG"
-
         try:
             if tool_name == "leann_search":
                 cmd = [
@@ -76,18 +71,14 @@ def handle_request(request):
                     "--recompute-embeddings",
                     f"--top-k={args.get('top_k', 5)}",
                 ]
-                result = subprocess.run(cmd, capture_output=True, text=True, cwd=cwd, env=env)
+                result = subprocess.run(cmd, capture_output=True, text=True)
 
             elif tool_name == "leann_ask":
                 cmd = f'echo "{args["question"]}" | leann ask {args["index_name"]} --recompute-embeddings --llm ollama --model qwen3:8b'
-                result = subprocess.run(
-                    cmd, shell=True, capture_output=True, text=True, cwd=cwd, env=env
-                )
+                result = subprocess.run(cmd, shell=True, capture_output=True, text=True)
 
             elif tool_name == "leann_list":
-                result = subprocess.run(
-                    ["leann", "list"], capture_output=True, text=True, cwd=cwd, env=env
-                )
+                result = subprocess.run(["leann", "list"], capture_output=True, text=True)
 
             return {
                 "jsonrpc": "2.0",

packages/leann-mcp/README.md

@@ -7,7 +7,7 @@ Intelligent code assistance using LEANN's vector search directly in Claude Code.
 First, install LEANN CLI globally:
 
 ```bash
-uv tool install leann
+uv tool install leann-core
 ```
 
 This makes the `leann` command available system-wide, which `leann_mcp` requires.

packages/leann/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "leann"
-version = "0.2.1"
+version = "0.2.4"
 description = "LEANN - The smallest vector index in the world. RAG Everything with LEANN!"
 readme = "README.md"
 requires-python = ">=3.9"