fix: Update DiskANN submodule with LAPACKE library linking fix

- Points to commit 19f9603 with explicit LAPACKE library discovery and linking
- Resolves 'undefined symbol: LAPACKE_sgesdd' runtime error on ARM64 Linux
- Completes ARM64 Linux wheel build compatibility for Docker deployments

🤖 Generated with [Claude Code](https://claude.ai/code)

Co-Authored-By: Claude <noreply@anthropic.com>

packages/leann-backend-diskann/pyproject.toml

@@ -4,8 +4,8 @@ build-backend = "scikit_build_core.build"
 
 [project]
 name = "leann-backend-diskann"
-version = "0.3.3"
-dependencies = ["leann-core==0.3.3", "numpy", "protobuf>=3.19.0"]
+version = "0.3.2"
+dependencies = ["leann-core==0.3.2", "numpy", "protobuf>=3.19.0"]
 
 [tool.scikit-build]
 # Key: simplified CMake path

packages/leann-backend-hnsw/pyproject.toml

@@ -6,10 +6,10 @@ build-backend = "scikit_build_core.build"
 
 [project]
 name = "leann-backend-hnsw"
-version = "0.3.3"
+version = "0.3.2"
 description = "Custom-built HNSW (Faiss) backend for the Leann toolkit."
 dependencies = [
-    "leann-core==0.3.3",
+    "leann-core==0.3.2",
     "numpy",
     "pyzmq>=23.0.0",
     "msgpack>=1.0.0",

packages/leann-core/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "leann-core"
-version = "0.3.3"
+version = "0.3.2"
 description = "Core API and plugin system for LEANN"
 readme = "README.md"
 requires-python = ">=3.9"

packages/leann-core/src/leann/cli.py

@@ -322,17 +322,9 @@ Examples:
 
         return basic_matches
 
-    def _should_exclude_file(self, file_path: Path, gitignore_matches) -> bool:
-        """Check if a file should be excluded using gitignore parser.
-
-        Always match against absolute, posix-style paths for consistency with
-        gitignore_parser expectations.
-        """
-        try:
-            absolute_path = file_path.resolve()
-        except Exception:
-            absolute_path = Path(str(file_path))
-        return gitignore_matches(absolute_path.as_posix())
+    def _should_exclude_file(self, relative_path: Path, gitignore_matches) -> bool:
+        """Check if a file should be excluded using gitignore parser."""
+        return gitignore_matches(str(relative_path))
 
     def _is_git_submodule(self, path: Path) -> bool:
         """Check if a path is a git submodule."""
@@ -404,9 +396,7 @@ Examples:
         print(f"   {current_path}")
         print("   " + "─" * 45)
 
-        current_indexes = self._discover_indexes_in_project(
-            current_path, exclude_dirs=other_projects
-        )
+        current_indexes = self._discover_indexes_in_project(current_path)
         if current_indexes:
             for idx in current_indexes:
                 total_indexes += 1
@@ -445,14 +435,9 @@ Examples:
             print("   leann build my-docs --docs ./documents")
         else:
             # Count only projects that have at least one discoverable index
-            projects_count = 0
-            for p in valid_projects:
-                if p == current_path:
-                    discovered = self._discover_indexes_in_project(p, exclude_dirs=other_projects)
-                else:
-                    discovered = self._discover_indexes_in_project(p)
-                if len(discovered) > 0:
-                    projects_count += 1
+            projects_count = sum(
+                1 for p in valid_projects if len(self._discover_indexes_in_project(p)) > 0
+            )
             print(f"📊 Total: {total_indexes} indexes across {projects_count} projects")
 
             if current_indexes_count > 0:
@@ -469,22 +454,9 @@ Examples:
                 print("\n💡 Create your first index:")
                 print("   leann build my-docs --docs ./documents")
 
-    def _discover_indexes_in_project(
-        self, project_path: Path, exclude_dirs: Optional[list[Path]] = None
-    ):
-        """Discover all indexes in a project directory (both CLI and apps formats)
-
-        exclude_dirs: when provided, skip any APP-format index files that are
-        located under these directories. This prevents duplicates when the
-        current project is a parent directory of other registered projects.
-        """
+    def _discover_indexes_in_project(self, project_path: Path):
+        """Discover all indexes in a project directory (both CLI and apps formats)"""
         indexes = []
-        exclude_dirs = exclude_dirs or []
-        # normalize to resolved paths once for comparison
-        try:
-            exclude_dirs_resolved = [p.resolve() for p in exclude_dirs]
-        except Exception:
-            exclude_dirs_resolved = exclude_dirs
 
         # 1. CLI format: .leann/indexes/index_name/
         cli_indexes_dir = project_path / ".leann" / "indexes"
@@ -523,17 +495,6 @@ Examples:
                         continue
                 except Exception:
                     pass
-                # Skip meta files that live under excluded directories
-                try:
-                    meta_parent_resolved = meta_file.parent.resolve()
-                    if any(
-                        meta_parent_resolved.is_relative_to(ex_dir)
-                        for ex_dir in exclude_dirs_resolved
-                    ):
-                        continue
-                except Exception:
-                    # best effort; if resolve or comparison fails, do not exclude
-                    pass
                 # Use the parent directory name as the app index display name
                 display_name = meta_file.parent.name
                 # Extract file base used to store files
@@ -1061,8 +1022,7 @@ Examples:
 
             # Try to use better PDF parsers first, but only if PDFs are requested
             documents = []
-            # Use resolved absolute paths to avoid mismatches (symlinks, relative vs absolute)
-            docs_path = Path(docs_dir).resolve()
+            docs_path = Path(docs_dir)
 
             # Check if we should process PDFs
             should_process_pdfs = custom_file_types is None or ".pdf" in custom_file_types
@@ -1071,15 +1031,10 @@ Examples:
                 for file_path in docs_path.rglob("*.pdf"):
                     # Check if file matches any exclude pattern
                     try:
-                        # Ensure both paths are resolved before computing relativity
-                        file_path_resolved = file_path.resolve()
-                        # Determine directory scope using the non-resolved path to avoid
-                        # misclassifying symlinked entries as outside the docs directory
                         relative_path = file_path.relative_to(docs_path)
                         if not include_hidden and _path_has_hidden_segment(relative_path):
                             continue
-                        # Use absolute path for gitignore matching
-                        if self._should_exclude_file(file_path_resolved, gitignore_matches):
+                        if self._should_exclude_file(relative_path, gitignore_matches):
                             continue
                     except ValueError:
                         # Skip files that can't be made relative to docs_path
@@ -1122,11 +1077,10 @@ Examples:
                 ) -> bool:
                     """Return True if file should be included (not excluded)"""
                     try:
-                        docs_path_obj = Path(docs_dir).resolve()
-                        file_path_obj = Path(file_path).resolve()
-                        # Use absolute path for gitignore matching
-                        _ = file_path_obj.relative_to(docs_path_obj)  # validate scope
-                        return not self._should_exclude_file(file_path_obj, gitignore_matches)
+                        docs_path_obj = Path(docs_dir)
+                        file_path_obj = Path(file_path)
+                        relative_path = file_path_obj.relative_to(docs_path_obj)
+                        return not self._should_exclude_file(relative_path, gitignore_matches)
                     except (ValueError, OSError):
                         return True  # Include files that can't be processed
 

packages/leann/pyproject.toml

@@ -4,7 +4,7 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "leann"
-version = "0.3.3"
+version = "0.3.2"
 description = "LEANN - The smallest vector index in the world. RAG Everything with LEANN!"
 readme = "README.md"
 requires-python = ">=3.9"