reproduce docvqa results and add debug file
This commit is contained in:
132
apps/multimodal/vision-based-pdf-multi-vector/colqwen_forward.py
Executable file
132
apps/multimodal/vision-based-pdf-multi-vector/colqwen_forward.py
Executable file
@@ -0,0 +1,132 @@
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#!/usr/bin/env python3
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"""Simple test script to test colqwen2 forward pass with a single image."""
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import os
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import sys
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from pathlib import Path
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# Add the current directory to path to import leann_multi_vector
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sys.path.insert(0, str(Path(__file__).parent))
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from PIL import Image
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import torch
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from leann_multi_vector import _load_colvision, _embed_images, _ensure_repo_paths_importable
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# Ensure repo paths are importable
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_ensure_repo_paths_importable(__file__)
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# Set environment variable
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os.environ["TOKENIZERS_PARALLELISM"] = "false"
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def create_test_image():
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"""Create a simple test image."""
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# Create a simple RGB image (800x600)
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img = Image.new('RGB', (800, 600), color='white')
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return img
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def load_test_image_from_file():
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"""Try to load an image from the indexes directory if available."""
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# Try to find an existing image in the indexes directory
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indexes_dir = Path(__file__).parent / "indexes"
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# Look for images in common locations
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possible_paths = [
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indexes_dir / "vidore_fastplaid" / "images",
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indexes_dir / "colvision_large.leann.images",
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indexes_dir / "colvision.leann.images",
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]
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for img_dir in possible_paths:
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if img_dir.exists():
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# Find first image file
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for ext in ['.png', '.jpg', '.jpeg']:
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for img_file in img_dir.glob(f'*{ext}'):
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print(f"Loading test image from: {img_file}")
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return Image.open(img_file)
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return None
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def main():
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print("=" * 60)
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print("Testing ColQwen2 Forward Pass")
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print("=" * 60)
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# Step 1: Load or create test image
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print("\n[Step 1] Loading test image...")
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test_image = load_test_image_from_file()
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if test_image is None:
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print("No existing image found, creating a simple test image...")
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test_image = create_test_image()
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else:
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print(f"✓ Loaded image: {test_image.size} ({test_image.mode})")
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# Convert to RGB if needed
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if test_image.mode != 'RGB':
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test_image = test_image.convert('RGB')
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print(f"✓ Converted to RGB: {test_image.size}")
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# Step 2: Load model
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print("\n[Step 2] Loading ColQwen2 model...")
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try:
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model_name, model, processor, device_str, device, dtype = _load_colvision("colqwen2")
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print(f"✓ Model loaded: {model_name}")
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print(f"✓ Device: {device_str}, dtype: {dtype}")
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# Print model info
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if hasattr(model, 'device'):
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print(f"✓ Model device: {model.device}")
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if hasattr(model, 'dtype'):
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print(f"✓ Model dtype: {model.dtype}")
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except Exception as e:
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print(f"✗ Error loading model: {e}")
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import traceback
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traceback.print_exc()
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return
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# Step 3: Test forward pass
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print("\n[Step 3] Running forward pass...")
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try:
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# Use the _embed_images function which handles batching and forward pass
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images = [test_image]
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print(f"Processing {len(images)} image(s)...")
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doc_vecs = _embed_images(model, processor, images)
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print(f"✓ Forward pass completed!")
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print(f"✓ Number of embeddings: {len(doc_vecs)}")
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if len(doc_vecs) > 0:
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emb = doc_vecs[0]
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print(f"✓ Embedding shape: {emb.shape}")
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print(f"✓ Embedding dtype: {emb.dtype}")
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print(f"✓ Embedding stats:")
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print(f" - Min: {emb.min().item():.4f}")
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print(f" - Max: {emb.max().item():.4f}")
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print(f" - Mean: {emb.mean().item():.4f}")
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print(f" - Std: {emb.std().item():.4f}")
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# Check for NaN or Inf
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if torch.isnan(emb).any():
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print("⚠ Warning: Embedding contains NaN values!")
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if torch.isinf(emb).any():
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print("⚠ Warning: Embedding contains Inf values!")
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except Exception as e:
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print(f"✗ Error during forward pass: {e}")
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import traceback
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traceback.print_exc()
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return
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print("\n" + "=" * 60)
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print("Test completed successfully!")
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print("=" * 60)
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if __name__ == "__main__":
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main()
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@@ -236,14 +236,12 @@ def _embed_queries(model, processor, queries: list[str]) -> list[Any]:
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with torch.no_grad():
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with torch.no_grad():
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for i in tqdm(range(0, len(queries), batch_size), desc="Embedding queries"):
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for i in tqdm(range(0, len(queries), batch_size), desc="Embedding queries"):
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batch_queries = queries[i:i + batch_size]
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batch_queries = queries[i : i + batch_size]
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# Match MTEB: manually add query_prefix + text + query_augmentation_token * 10
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# Match MTEB: manually add query_prefix + text + query_augmentation_token * 10
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# Then process_queries will add them again (resulting in 20 augmentation tokens total)
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# Then process_queries will add them again (resulting in 20 augmentation tokens total)
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batch = [
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batch = [
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processor.query_prefix
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processor.query_prefix + t + processor.query_augmentation_token * 10
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+ t
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+ processor.query_augmentation_token * 10
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for t in batch_queries
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for t in batch_queries
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]
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]
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inputs = processor.process_queries(batch)
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inputs = processor.process_queries(batch)
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@@ -331,7 +329,11 @@ def _build_fast_plaid_index(
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if i % 1000 == 0:
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if i % 1000 == 0:
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print(f" Converting embedding {i}/{len(doc_vecs)}...")
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print(f" Converting embedding {i}/{len(doc_vecs)}...")
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if not isinstance(vec, torch.Tensor):
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if not isinstance(vec, torch.Tensor):
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vec = torch.tensor(vec) if isinstance(vec, np.ndarray) else torch.from_numpy(np.array(vec))
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vec = (
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torch.tensor(vec)
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if isinstance(vec, np.ndarray)
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else torch.from_numpy(np.array(vec))
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)
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# Ensure float32 for Fast-Plaid
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# Ensure float32 for Fast-Plaid
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if vec.dtype != torch.float32:
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if vec.dtype != torch.float32:
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vec = vec.float()
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vec = vec.float()
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@@ -346,19 +348,22 @@ def _build_fast_plaid_index(
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print(f" Preparing metadata for {len(filepaths)} documents...")
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print(f" Preparing metadata for {len(filepaths)} documents...")
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metadata_list = []
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metadata_list = []
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for i, filepath in enumerate(filepaths):
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for i, filepath in enumerate(filepaths):
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metadata_list.append({
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metadata_list.append(
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"filepath": filepath,
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{
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"index": i,
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"filepath": filepath,
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})
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"index": i,
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}
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)
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# Create Fast-Plaid index
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# Create Fast-Plaid index
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print(f" Creating FastPlaid object with index path: {index_path}")
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print(f" Creating FastPlaid object with index path: {index_path}")
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try:
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try:
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fast_plaid_index = fast_plaid_search.FastPlaid(index=index_path)
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fast_plaid_index = fast_plaid_search.FastPlaid(index=index_path)
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print(f" FastPlaid object created successfully")
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print(" FastPlaid object created successfully")
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except Exception as e:
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except Exception as e:
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print(f" Error creating FastPlaid object: {type(e).__name__}: {e}")
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print(f" Error creating FastPlaid object: {type(e).__name__}: {e}")
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import traceback
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import traceback
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traceback.print_exc()
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traceback.print_exc()
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raise
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raise
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@@ -368,10 +373,11 @@ def _build_fast_plaid_index(
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documents_embeddings=documents_embeddings,
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documents_embeddings=documents_embeddings,
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metadata=metadata_list,
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metadata=metadata_list,
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)
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)
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print(f" Fast-Plaid index created successfully")
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print(" Fast-Plaid index created successfully")
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except Exception as e:
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except Exception as e:
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print(f" Error creating Fast-Plaid index: {type(e).__name__}: {e}")
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print(f" Error creating Fast-Plaid index: {type(e).__name__}: {e}")
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import traceback
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import traceback
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traceback.print_exc()
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traceback.print_exc()
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raise
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raise
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@@ -475,7 +481,11 @@ def _search_fast_plaid(
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# Ensure query is a torch tensor
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# Ensure query is a torch tensor
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if not isinstance(query_vec, torch.Tensor):
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if not isinstance(query_vec, torch.Tensor):
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q_vec_tensor = torch.tensor(query_vec) if isinstance(query_vec, np.ndarray) else torch.from_numpy(np.array(query_vec))
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q_vec_tensor = (
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torch.tensor(query_vec)
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if isinstance(query_vec, np.ndarray)
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else torch.from_numpy(np.array(query_vec))
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)
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else:
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else:
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q_vec_tensor = query_vec
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q_vec_tensor = query_vec
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@@ -508,16 +518,35 @@ def _get_fast_plaid_image(index_path: str, doc_id: int) -> Optional[Image.Image]
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Args:
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Args:
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index_path: Path to the Fast-Plaid index
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index_path: Path to the Fast-Plaid index
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doc_id: Document ID
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doc_id: Document ID returned by Fast-Plaid search
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Returns:
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Returns:
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PIL Image if found, None otherwise
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PIL Image if found, None otherwise
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Note: Uses metadata['index'] to get the actual file index, as Fast-Plaid
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doc_id may differ from the file naming index.
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"""
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"""
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# First get metadata to find the actual index used for file naming
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metadata = _get_fast_plaid_metadata(index_path, doc_id)
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if metadata is None:
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# Fallback: try using doc_id directly
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file_index = doc_id
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else:
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# Use the 'index' field from metadata, which matches the file naming
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file_index = metadata.get("index", doc_id)
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images_dir = Path(index_path) / "images"
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images_dir = Path(index_path) / "images"
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image_path = images_dir / f"doc_{doc_id}.png"
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image_path = images_dir / f"doc_{file_index}.png"
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if image_path.exists():
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if image_path.exists():
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return Image.open(image_path)
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return Image.open(image_path)
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# If not found with index, try doc_id as fallback
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if file_index != doc_id:
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fallback_path = images_dir / f"doc_{doc_id}.png"
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if fallback_path.exists():
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return Image.open(fallback_path)
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return None
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return None
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@@ -534,6 +563,7 @@ def _get_fast_plaid_metadata(index_path: str, doc_id: int) -> Optional[dict]:
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"""
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"""
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try:
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try:
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from fast_plaid import filtering
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from fast_plaid import filtering
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metadata_list = filtering.get(index=index_path, subset=[doc_id])
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metadata_list = filtering.get(index=index_path, subset=[doc_id])
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if metadata_list and len(metadata_list) > 0:
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if metadata_list and len(metadata_list) > 0:
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return metadata_list[0]
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return metadata_list[0]
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@@ -1060,7 +1090,7 @@ class ViDoReBenchmarkEvaluator:
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use_fast_plaid: bool = False,
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use_fast_plaid: bool = False,
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top_k: int = 100,
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top_k: int = 100,
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first_stage_k: int = 500,
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first_stage_k: int = 500,
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k_values: list[int] = None,
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k_values: Optional[list[int]] = None,
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):
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):
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"""
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"""
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Initialize the evaluator.
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Initialize the evaluator.
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@@ -1087,7 +1117,9 @@ class ViDoReBenchmarkEvaluator:
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"""Lazy load the model."""
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"""Lazy load the model."""
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if self._model is None:
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if self._model is None:
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print(f"\nLoading model: {self.model_name}")
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print(f"\nLoading model: {self.model_name}")
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self._model_name_actual, self._model, self._processor, _, _, _ = _load_colvision(self.model_name)
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self._model_name_actual, self._model, self._processor, _, _, _ = _load_colvision(
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self.model_name
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)
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print(f"Model loaded: {self._model_name_actual}")
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print(f"Model loaded: {self._model_name_actual}")
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def build_index_from_corpus(
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def build_index_from_corpus(
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@@ -1141,7 +1173,7 @@ class ViDoReBenchmarkEvaluator:
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doc_vecs = _embed_images(self._model, self._processor, images)
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doc_vecs = _embed_images(self._model, self._processor, images)
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retriever = _build_index(index_path, doc_vecs, corpus_ids, images)
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retriever = _build_index(index_path, doc_vecs, corpus_ids, images)
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print(f"LEANN index built")
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print("LEANN index built")
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return retriever, corpus_ids
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return retriever, corpus_ids
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def search_queries(
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def search_queries(
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@@ -1194,8 +1226,11 @@ class ViDoReBenchmarkEvaluator:
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else:
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else:
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# LEANN search
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# LEANN search
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import torch
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import torch
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query_np = query_vec.float().numpy() if isinstance(query_vec, torch.Tensor) else query_vec
|
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search_results = index_or_retriever.search_exact_all(query_np, topk=self.top_k)
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query_np = (
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query_vec.float().numpy() if isinstance(query_vec, torch.Tensor) else query_vec
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)
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search_results = index_or_retriever.search_exact(query_np, topk=self.top_k)
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query_results = {}
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query_results = {}
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for score, doc_id in search_results:
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for score, doc_id in search_results:
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if doc_id < len(corpus_ids):
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if doc_id < len(corpus_ids):
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@@ -1210,7 +1245,7 @@ class ViDoReBenchmarkEvaluator:
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def evaluate_results(
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def evaluate_results(
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results: dict[str, dict[str, float]],
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results: dict[str, dict[str, float]],
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qrels: dict[str, dict[str, int]],
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qrels: dict[str, dict[str, int]],
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k_values: list[int] = None,
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k_values: Optional[list[int]] = None,
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) -> dict[str, float]:
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) -> dict[str, float]:
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"""
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"""
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Evaluate retrieval results using NDCG and other metrics.
|
Evaluate retrieval results using NDCG and other metrics.
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@@ -1224,13 +1259,14 @@ class ViDoReBenchmarkEvaluator:
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Dictionary of metric scores
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Dictionary of metric scores
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"""
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"""
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try:
|
try:
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import pytrec_eval
|
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from mteb._evaluators.retrieval_metrics import (
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from mteb._evaluators.retrieval_metrics import (
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calculate_retrieval_scores,
|
calculate_retrieval_scores,
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make_score_dict,
|
make_score_dict,
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)
|
)
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except ImportError:
|
except ImportError:
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raise ImportError("pytrec_eval is required for evaluation. Install with: pip install pytrec-eval")
|
raise ImportError(
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"pytrec_eval is required for evaluation. Install with: pip install pytrec-eval"
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)
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if k_values is None:
|
if k_values is None:
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k_values = [1, 3, 5, 10, 100]
|
k_values = [1, 3, 5, 10, 100]
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@@ -1255,12 +1291,16 @@ class ViDoReBenchmarkEvaluator:
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# pytrec_eval only evaluates queries in qrels, so we need to ensure
|
# pytrec_eval only evaluates queries in qrels, so we need to ensure
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# results contains all queries in qrels, and filter out queries not in qrels
|
# results contains all queries in qrels, and filter out queries not in qrels
|
||||||
results_filtered = {qid: res for qid, res in results.items() if qid in qrels}
|
results_filtered = {qid: res for qid, res in results.items() if qid in qrels}
|
||||||
qrels_filtered = {qid: rel_docs for qid, rel_docs in qrels.items() if qid in results_filtered}
|
qrels_filtered = {
|
||||||
|
qid: rel_docs for qid, rel_docs in qrels.items() if qid in results_filtered
|
||||||
|
}
|
||||||
|
|
||||||
print(f"After filtering: {len(results_filtered)} results, {len(qrels_filtered)} qrels")
|
print(f"After filtering: {len(results_filtered)} results, {len(qrels_filtered)} qrels")
|
||||||
|
|
||||||
if len(results_filtered) != len(qrels_filtered):
|
if len(results_filtered) != len(qrels_filtered):
|
||||||
print(f"Warning: Mismatch between results ({len(results_filtered)}) and qrels ({len(qrels_filtered)}) queries")
|
print(
|
||||||
|
f"Warning: Mismatch between results ({len(results_filtered)}) and qrels ({len(qrels_filtered)}) queries"
|
||||||
|
)
|
||||||
missing_in_results = set(qrels.keys()) - set(results.keys())
|
missing_in_results = set(qrels.keys()) - set(results.keys())
|
||||||
if missing_in_results:
|
if missing_in_results:
|
||||||
print(f"Queries in qrels but not in results: {len(missing_in_results)} queries")
|
print(f"Queries in qrels but not in results: {len(missing_in_results)} queries")
|
||||||
@@ -1269,7 +1309,7 @@ class ViDoReBenchmarkEvaluator:
|
|||||||
# Convert qrels to pytrec_eval format
|
# Convert qrels to pytrec_eval format
|
||||||
qrels_pytrec = {}
|
qrels_pytrec = {}
|
||||||
for qid, rel_docs in qrels_filtered.items():
|
for qid, rel_docs in qrels_filtered.items():
|
||||||
qrels_pytrec[qid] = {did: score for did, score in rel_docs.items()}
|
qrels_pytrec[qid] = dict(rel_docs.items())
|
||||||
|
|
||||||
# Evaluate
|
# Evaluate
|
||||||
eval_result = calculate_retrieval_scores(
|
eval_result = calculate_retrieval_scores(
|
||||||
|
|||||||
@@ -83,7 +83,7 @@ INDEX_PATH: str = "./indexes/colvision_large.leann"
|
|||||||
# These are now command-line arguments (see CLI overrides section)
|
# These are now command-line arguments (see CLI overrides section)
|
||||||
TOPK: int = 3
|
TOPK: int = 3
|
||||||
FIRST_STAGE_K: int = 500
|
FIRST_STAGE_K: int = 500
|
||||||
REBUILD_INDEX: bool = False
|
REBUILD_INDEX: bool = True
|
||||||
|
|
||||||
# Artifacts
|
# Artifacts
|
||||||
SAVE_TOP_IMAGE: Optional[str] = "./figures/retrieved_page.png"
|
SAVE_TOP_IMAGE: Optional[str] = "./figures/retrieved_page.png"
|
||||||
@@ -122,11 +122,18 @@ parser.add_argument(
|
|||||||
default="./indexes/colvision_fastplaid",
|
default="./indexes/colvision_fastplaid",
|
||||||
help="Path to the Fast-Plaid index. Default: './indexes/colvision_fastplaid'",
|
help="Path to the Fast-Plaid index. Default: './indexes/colvision_fastplaid'",
|
||||||
)
|
)
|
||||||
|
parser.add_argument(
|
||||||
|
"--topk",
|
||||||
|
type=int,
|
||||||
|
default=TOPK,
|
||||||
|
help=f"Number of top results to retrieve. Default: {TOPK}",
|
||||||
|
)
|
||||||
cli_args, _unknown = parser.parse_known_args()
|
cli_args, _unknown = parser.parse_known_args()
|
||||||
SEARCH_METHOD: str = cli_args.search_method
|
SEARCH_METHOD: str = cli_args.search_method
|
||||||
QUERY = cli_args.query # Override QUERY with CLI argument if provided
|
QUERY = cli_args.query # Override QUERY with CLI argument if provided
|
||||||
USE_FAST_PLAID: bool = cli_args.use_fast_plaid
|
USE_FAST_PLAID: bool = cli_args.use_fast_plaid
|
||||||
FAST_PLAID_INDEX_PATH: str = cli_args.fast_plaid_index_path
|
FAST_PLAID_INDEX_PATH: str = cli_args.fast_plaid_index_path
|
||||||
|
TOPK: int = cli_args.topk # Override TOPK with CLI argument if provided
|
||||||
|
|
||||||
# %%
|
# %%
|
||||||
|
|
||||||
@@ -548,7 +555,10 @@ if not results:
|
|||||||
print("No results found.")
|
print("No results found.")
|
||||||
else:
|
else:
|
||||||
print(f'Top {len(results)} results for query: "{QUERY}"')
|
print(f'Top {len(results)} results for query: "{QUERY}"')
|
||||||
|
print("\n[DEBUG] Retrieval details:")
|
||||||
top_images: list[Image.Image] = []
|
top_images: list[Image.Image] = []
|
||||||
|
image_hashes = {} # Track image hashes to detect duplicates
|
||||||
|
|
||||||
for rank, (score, doc_id) in enumerate(results, start=1):
|
for rank, (score, doc_id) in enumerate(results, start=1):
|
||||||
# Retrieve image and metadata based on index type
|
# Retrieve image and metadata based on index type
|
||||||
if USE_FAST_PLAID:
|
if USE_FAST_PLAID:
|
||||||
@@ -572,8 +582,26 @@ else:
|
|||||||
path = metadata.get("filepath", "unknown") if metadata else "unknown"
|
path = metadata.get("filepath", "unknown") if metadata else "unknown"
|
||||||
top_images.append(image)
|
top_images.append(image)
|
||||||
|
|
||||||
# For HF dataset, path is a descriptive identifier, not a real file path
|
# Calculate image hash to detect duplicates
|
||||||
print(f"{rank}) MaxSim: {score:.4f}, Page: {path}")
|
import hashlib
|
||||||
|
import io
|
||||||
|
# Convert image to bytes for hashing
|
||||||
|
img_bytes = io.BytesIO()
|
||||||
|
image.save(img_bytes, format='PNG')
|
||||||
|
image_bytes = img_bytes.getvalue()
|
||||||
|
image_hash = hashlib.md5(image_bytes).hexdigest()[:8]
|
||||||
|
|
||||||
|
# Check if this image was already seen
|
||||||
|
duplicate_info = ""
|
||||||
|
if image_hash in image_hashes:
|
||||||
|
duplicate_info = f" [DUPLICATE of rank {image_hashes[image_hash]}]"
|
||||||
|
else:
|
||||||
|
image_hashes[image_hash] = rank
|
||||||
|
|
||||||
|
# Print detailed information
|
||||||
|
print(f"{rank}) doc_id={doc_id}, MaxSim={score:.4f}, Page={path}, ImageHash={image_hash}{duplicate_info}")
|
||||||
|
if metadata:
|
||||||
|
print(f" Metadata: {metadata}")
|
||||||
|
|
||||||
if SAVE_TOP_IMAGE:
|
if SAVE_TOP_IMAGE:
|
||||||
from pathlib import Path as _Path
|
from pathlib import Path as _Path
|
||||||
|
|||||||
@@ -28,11 +28,9 @@ import os
|
|||||||
from typing import Optional
|
from typing import Optional
|
||||||
|
|
||||||
from datasets import load_dataset
|
from datasets import load_dataset
|
||||||
from PIL import Image
|
|
||||||
|
|
||||||
from leann_multi_vector import (
|
from leann_multi_vector import (
|
||||||
_ensure_repo_paths_importable,
|
|
||||||
ViDoReBenchmarkEvaluator,
|
ViDoReBenchmarkEvaluator,
|
||||||
|
_ensure_repo_paths_importable,
|
||||||
)
|
)
|
||||||
|
|
||||||
_ensure_repo_paths_importable(__file__)
|
_ensure_repo_paths_importable(__file__)
|
||||||
@@ -128,7 +126,9 @@ def load_vidore_v1_data(
|
|||||||
elif "page_image" in row:
|
elif "page_image" in row:
|
||||||
corpus[corpus_id] = row["page_image"]
|
corpus[corpus_id] = row["page_image"]
|
||||||
else:
|
else:
|
||||||
raise ValueError(f"No image field found in corpus. Available fields: {list(row.keys())}")
|
raise ValueError(
|
||||||
|
f"No image field found in corpus. Available fields: {list(row.keys())}"
|
||||||
|
)
|
||||||
|
|
||||||
# Load qrels (relevance judgments)
|
# Load qrels (relevance judgments)
|
||||||
qrels_ds = load_dataset(dataset_path, "qrels", split=split, revision=revision)
|
qrels_ds = load_dataset(dataset_path, "qrels", split=split, revision=revision)
|
||||||
@@ -141,7 +141,9 @@ def load_vidore_v1_data(
|
|||||||
qrels[query_id] = {}
|
qrels[query_id] = {}
|
||||||
qrels[query_id][corpus_id] = int(row["score"])
|
qrels[query_id][corpus_id] = int(row["score"])
|
||||||
|
|
||||||
print(f"Loaded {len(queries)} queries, {len(corpus)} corpus items, {len(qrels)} query-relevance mappings")
|
print(
|
||||||
|
f"Loaded {len(queries)} queries, {len(corpus)} corpus items, {len(qrels)} query-relevance mappings"
|
||||||
|
)
|
||||||
|
|
||||||
# Filter qrels to only include queries that exist
|
# Filter qrels to only include queries that exist
|
||||||
qrels = {qid: rel_docs for qid, rel_docs in qrels.items() if qid in queries}
|
qrels = {qid: rel_docs for qid, rel_docs in qrels.items() if qid in queries}
|
||||||
@@ -149,9 +151,13 @@ def load_vidore_v1_data(
|
|||||||
# Filter out queries without any relevant documents (matching MTEB behavior)
|
# Filter out queries without any relevant documents (matching MTEB behavior)
|
||||||
# This is important for correct NDCG calculation
|
# This is important for correct NDCG calculation
|
||||||
qrels_filtered = {qid: rel_docs for qid, rel_docs in qrels.items() if len(rel_docs) > 0}
|
qrels_filtered = {qid: rel_docs for qid, rel_docs in qrels.items() if len(rel_docs) > 0}
|
||||||
queries_filtered = {qid: query_text for qid, query_text in queries.items() if qid in qrels_filtered}
|
queries_filtered = {
|
||||||
|
qid: query_text for qid, query_text in queries.items() if qid in qrels_filtered
|
||||||
|
}
|
||||||
|
|
||||||
print(f"After filtering queries without positives: {len(queries_filtered)} queries, {len(qrels_filtered)} query-relevance mappings")
|
print(
|
||||||
|
f"After filtering queries without positives: {len(queries_filtered)} queries, {len(qrels_filtered)} query-relevance mappings"
|
||||||
|
)
|
||||||
|
|
||||||
return corpus, queries_filtered, qrels_filtered
|
return corpus, queries_filtered, qrels_filtered
|
||||||
|
|
||||||
@@ -165,15 +171,15 @@ def evaluate_task(
|
|||||||
rebuild_index: bool = False,
|
rebuild_index: bool = False,
|
||||||
top_k: int = 1000,
|
top_k: int = 1000,
|
||||||
first_stage_k: int = 500,
|
first_stage_k: int = 500,
|
||||||
k_values: list[int] = [1, 3, 5, 10, 20, 100, 1000],
|
k_values: Optional[list[int]] = None,
|
||||||
output_dir: Optional[str] = None,
|
output_dir: Optional[str] = None,
|
||||||
):
|
):
|
||||||
"""
|
"""
|
||||||
Evaluate a single ViDoRe v1 task.
|
Evaluate a single ViDoRe v1 task.
|
||||||
"""
|
"""
|
||||||
print(f"\n{'='*80}")
|
print(f"\n{'=' * 80}")
|
||||||
print(f"Evaluating task: {task_name}")
|
print(f"Evaluating task: {task_name}")
|
||||||
print(f"{'='*80}")
|
print(f"{'=' * 80}")
|
||||||
|
|
||||||
# Get task config
|
# Get task config
|
||||||
if task_name not in VIDORE_V1_TASKS:
|
if task_name not in VIDORE_V1_TASKS:
|
||||||
@@ -190,6 +196,10 @@ def evaluate_task(
|
|||||||
split="test",
|
split="test",
|
||||||
)
|
)
|
||||||
|
|
||||||
|
# Initialize k_values if not provided
|
||||||
|
if k_values is None:
|
||||||
|
k_values = [1, 3, 5, 10, 20, 100, 1000]
|
||||||
|
|
||||||
# Check if we have any queries
|
# Check if we have any queries
|
||||||
if len(queries) == 0:
|
if len(queries) == 0:
|
||||||
print(f"\nWarning: No queries found for task {task_name}. Skipping evaluation.")
|
print(f"\nWarning: No queries found for task {task_name}. Skipping evaluation.")
|
||||||
@@ -239,9 +249,9 @@ def evaluate_task(
|
|||||||
scores = evaluator.evaluate_results(results, qrels, k_values=k_values)
|
scores = evaluator.evaluate_results(results, qrels, k_values=k_values)
|
||||||
|
|
||||||
# Print results
|
# Print results
|
||||||
print(f"\n{'='*80}")
|
print(f"\n{'=' * 80}")
|
||||||
print(f"Results for {task_name}:")
|
print(f"Results for {task_name}:")
|
||||||
print(f"{'='*80}")
|
print(f"{'=' * 80}")
|
||||||
for metric, value in scores.items():
|
for metric, value in scores.items():
|
||||||
if isinstance(value, (int, float)):
|
if isinstance(value, (int, float)):
|
||||||
print(f" {metric}: {value:.5f}")
|
print(f" {metric}: {value:.5f}")
|
||||||
@@ -368,14 +378,15 @@ def main():
|
|||||||
except Exception as e:
|
except Exception as e:
|
||||||
print(f"\nError evaluating {task_name}: {e}")
|
print(f"\nError evaluating {task_name}: {e}")
|
||||||
import traceback
|
import traceback
|
||||||
|
|
||||||
traceback.print_exc()
|
traceback.print_exc()
|
||||||
continue
|
continue
|
||||||
|
|
||||||
# Print summary
|
# Print summary
|
||||||
if all_scores:
|
if all_scores:
|
||||||
print(f"\n{'='*80}")
|
print(f"\n{'=' * 80}")
|
||||||
print("SUMMARY")
|
print("SUMMARY")
|
||||||
print(f"{'='*80}")
|
print(f"{'=' * 80}")
|
||||||
for task_name, scores in all_scores.items():
|
for task_name, scores in all_scores.items():
|
||||||
print(f"\n{task_name}:")
|
print(f"\n{task_name}:")
|
||||||
# Print main metrics
|
# Print main metrics
|
||||||
@@ -386,4 +397,3 @@ def main():
|
|||||||
|
|
||||||
if __name__ == "__main__":
|
if __name__ == "__main__":
|
||||||
main()
|
main()
|
||||||
|
|
||||||
|
|||||||
@@ -28,11 +28,9 @@ import os
|
|||||||
from typing import Optional
|
from typing import Optional
|
||||||
|
|
||||||
from datasets import load_dataset
|
from datasets import load_dataset
|
||||||
from PIL import Image
|
|
||||||
|
|
||||||
from leann_multi_vector import (
|
from leann_multi_vector import (
|
||||||
_ensure_repo_paths_importable,
|
|
||||||
ViDoReBenchmarkEvaluator,
|
ViDoReBenchmarkEvaluator,
|
||||||
|
_ensure_repo_paths_importable,
|
||||||
)
|
)
|
||||||
|
|
||||||
_ensure_repo_paths_importable(__file__)
|
_ensure_repo_paths_importable(__file__)
|
||||||
@@ -105,21 +103,27 @@ def load_vidore_v2_data(
|
|||||||
query_ds_filtered = query_ds.filter(lambda x: x.get("language") == dataset_language)
|
query_ds_filtered = query_ds.filter(lambda x: x.get("language") == dataset_language)
|
||||||
# Check if filtering resulted in empty dataset
|
# Check if filtering resulted in empty dataset
|
||||||
if len(query_ds_filtered) == 0:
|
if len(query_ds_filtered) == 0:
|
||||||
print(f"Warning: No queries found after filtering by language '{language}' (mapped to '{dataset_language}').")
|
print(
|
||||||
|
f"Warning: No queries found after filtering by language '{language}' (mapped to '{dataset_language}')."
|
||||||
|
)
|
||||||
# Try with original language value (dataset might use simple names like 'english')
|
# Try with original language value (dataset might use simple names like 'english')
|
||||||
print(f"Trying with original language value '{language}'...")
|
print(f"Trying with original language value '{language}'...")
|
||||||
query_ds_filtered = query_ds.filter(lambda x: x.get("language") == language)
|
query_ds_filtered = query_ds.filter(lambda x: x.get("language") == language)
|
||||||
if len(query_ds_filtered) == 0:
|
if len(query_ds_filtered) == 0:
|
||||||
# Try to get a sample to see actual language values
|
# Try to get a sample to see actual language values
|
||||||
try:
|
try:
|
||||||
sample_ds = load_dataset(dataset_path, "queries", split=split, revision=revision)
|
sample_ds = load_dataset(
|
||||||
|
dataset_path, "queries", split=split, revision=revision
|
||||||
|
)
|
||||||
if len(sample_ds) > 0 and "language" in sample_ds.column_names:
|
if len(sample_ds) > 0 and "language" in sample_ds.column_names:
|
||||||
sample_langs = set(sample_ds["language"])
|
sample_langs = set(sample_ds["language"])
|
||||||
print(f"Available language values in dataset: {sample_langs}")
|
print(f"Available language values in dataset: {sample_langs}")
|
||||||
except Exception:
|
except Exception:
|
||||||
pass
|
pass
|
||||||
else:
|
else:
|
||||||
print(f"Found {len(query_ds_filtered)} queries using original language value '{language}'")
|
print(
|
||||||
|
f"Found {len(query_ds_filtered)} queries using original language value '{language}'"
|
||||||
|
)
|
||||||
query_ds = query_ds_filtered
|
query_ds = query_ds_filtered
|
||||||
|
|
||||||
queries = {}
|
queries = {}
|
||||||
@@ -139,7 +143,9 @@ def load_vidore_v2_data(
|
|||||||
elif "page_image" in row:
|
elif "page_image" in row:
|
||||||
corpus[corpus_id] = row["page_image"]
|
corpus[corpus_id] = row["page_image"]
|
||||||
else:
|
else:
|
||||||
raise ValueError(f"No image field found in corpus. Available fields: {list(row.keys())}")
|
raise ValueError(
|
||||||
|
f"No image field found in corpus. Available fields: {list(row.keys())}"
|
||||||
|
)
|
||||||
|
|
||||||
# Load qrels (relevance judgments)
|
# Load qrels (relevance judgments)
|
||||||
qrels_ds = load_dataset(dataset_path, "qrels", split=split, revision=revision)
|
qrels_ds = load_dataset(dataset_path, "qrels", split=split, revision=revision)
|
||||||
@@ -152,7 +158,9 @@ def load_vidore_v2_data(
|
|||||||
qrels[query_id] = {}
|
qrels[query_id] = {}
|
||||||
qrels[query_id][corpus_id] = int(row["score"])
|
qrels[query_id][corpus_id] = int(row["score"])
|
||||||
|
|
||||||
print(f"Loaded {len(queries)} queries, {len(corpus)} corpus items, {len(qrels)} query-relevance mappings")
|
print(
|
||||||
|
f"Loaded {len(queries)} queries, {len(corpus)} corpus items, {len(qrels)} query-relevance mappings"
|
||||||
|
)
|
||||||
|
|
||||||
# Filter qrels to only include queries that exist
|
# Filter qrels to only include queries that exist
|
||||||
qrels = {qid: rel_docs for qid, rel_docs in qrels.items() if qid in queries}
|
qrels = {qid: rel_docs for qid, rel_docs in qrels.items() if qid in queries}
|
||||||
@@ -160,9 +168,13 @@ def load_vidore_v2_data(
|
|||||||
# Filter out queries without any relevant documents (matching MTEB behavior)
|
# Filter out queries without any relevant documents (matching MTEB behavior)
|
||||||
# This is important for correct NDCG calculation
|
# This is important for correct NDCG calculation
|
||||||
qrels_filtered = {qid: rel_docs for qid, rel_docs in qrels.items() if len(rel_docs) > 0}
|
qrels_filtered = {qid: rel_docs for qid, rel_docs in qrels.items() if len(rel_docs) > 0}
|
||||||
queries_filtered = {qid: query_text for qid, query_text in queries.items() if qid in qrels_filtered}
|
queries_filtered = {
|
||||||
|
qid: query_text for qid, query_text in queries.items() if qid in qrels_filtered
|
||||||
|
}
|
||||||
|
|
||||||
print(f"After filtering queries without positives: {len(queries_filtered)} queries, {len(qrels_filtered)} query-relevance mappings")
|
print(
|
||||||
|
f"After filtering queries without positives: {len(queries_filtered)} queries, {len(qrels_filtered)} query-relevance mappings"
|
||||||
|
)
|
||||||
|
|
||||||
return corpus, queries_filtered, qrels_filtered
|
return corpus, queries_filtered, qrels_filtered
|
||||||
|
|
||||||
@@ -177,15 +189,15 @@ def evaluate_task(
|
|||||||
rebuild_index: bool = False,
|
rebuild_index: bool = False,
|
||||||
top_k: int = 100,
|
top_k: int = 100,
|
||||||
first_stage_k: int = 500,
|
first_stage_k: int = 500,
|
||||||
k_values: list[int] = [1, 3, 5, 10, 100],
|
k_values: Optional[list[int]] = None,
|
||||||
output_dir: Optional[str] = None,
|
output_dir: Optional[str] = None,
|
||||||
):
|
):
|
||||||
"""
|
"""
|
||||||
Evaluate a single ViDoRe v2 task.
|
Evaluate a single ViDoRe v2 task.
|
||||||
"""
|
"""
|
||||||
print(f"\n{'='*80}")
|
print(f"\n{'=' * 80}")
|
||||||
print(f"Evaluating task: {task_name}")
|
print(f"Evaluating task: {task_name}")
|
||||||
print(f"{'='*80}")
|
print(f"{'=' * 80}")
|
||||||
|
|
||||||
# Get task config
|
# Get task config
|
||||||
if task_name not in VIDORE_V2_TASKS:
|
if task_name not in VIDORE_V2_TASKS:
|
||||||
@@ -207,6 +219,10 @@ def evaluate_task(
|
|||||||
else:
|
else:
|
||||||
language = None
|
language = None
|
||||||
|
|
||||||
|
# Initialize k_values if not provided
|
||||||
|
if k_values is None:
|
||||||
|
k_values = [1, 3, 5, 10, 100]
|
||||||
|
|
||||||
# Load data
|
# Load data
|
||||||
corpus, queries, qrels = load_vidore_v2_data(
|
corpus, queries, qrels = load_vidore_v2_data(
|
||||||
dataset_path=dataset_path,
|
dataset_path=dataset_path,
|
||||||
@@ -217,7 +233,9 @@ def evaluate_task(
|
|||||||
|
|
||||||
# Check if we have any queries
|
# Check if we have any queries
|
||||||
if len(queries) == 0:
|
if len(queries) == 0:
|
||||||
print(f"\nWarning: No queries found for task {task_name} with language {language}. Skipping evaluation.")
|
print(
|
||||||
|
f"\nWarning: No queries found for task {task_name} with language {language}. Skipping evaluation."
|
||||||
|
)
|
||||||
# Return zero scores
|
# Return zero scores
|
||||||
scores = {}
|
scores = {}
|
||||||
for k in k_values:
|
for k in k_values:
|
||||||
@@ -264,9 +282,9 @@ def evaluate_task(
|
|||||||
scores = evaluator.evaluate_results(results, qrels, k_values=k_values)
|
scores = evaluator.evaluate_results(results, qrels, k_values=k_values)
|
||||||
|
|
||||||
# Print results
|
# Print results
|
||||||
print(f"\n{'='*80}")
|
print(f"\n{'=' * 80}")
|
||||||
print(f"Results for {task_name}:")
|
print(f"Results for {task_name}:")
|
||||||
print(f"{'='*80}")
|
print(f"{'=' * 80}")
|
||||||
for metric, value in scores.items():
|
for metric, value in scores.items():
|
||||||
if isinstance(value, (int, float)):
|
if isinstance(value, (int, float)):
|
||||||
print(f" {metric}: {value:.5f}")
|
print(f" {metric}: {value:.5f}")
|
||||||
@@ -400,14 +418,15 @@ def main():
|
|||||||
except Exception as e:
|
except Exception as e:
|
||||||
print(f"\nError evaluating {task_name}: {e}")
|
print(f"\nError evaluating {task_name}: {e}")
|
||||||
import traceback
|
import traceback
|
||||||
|
|
||||||
traceback.print_exc()
|
traceback.print_exc()
|
||||||
continue
|
continue
|
||||||
|
|
||||||
# Print summary
|
# Print summary
|
||||||
if all_scores:
|
if all_scores:
|
||||||
print(f"\n{'='*80}")
|
print(f"\n{'=' * 80}")
|
||||||
print("SUMMARY")
|
print("SUMMARY")
|
||||||
print(f"{'='*80}")
|
print(f"{'=' * 80}")
|
||||||
for task_name, scores in all_scores.items():
|
for task_name, scores in all_scores.items():
|
||||||
print(f"\n{task_name}:")
|
print(f"\n{task_name}:")
|
||||||
# Print main metrics
|
# Print main metrics
|
||||||
@@ -418,4 +437,3 @@ def main():
|
|||||||
|
|
||||||
if __name__ == "__main__":
|
if __name__ == "__main__":
|
||||||
main()
|
main()
|
||||||
|
|
||||||
|
|||||||
Reference in New Issue
Block a user